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I have a VPS with 2.25GB of RAM. MySQL is using 1.4GB with only four users on my site right now. It seems to use this amount even when no users are online. The available memory of my server regularly dips below 100MB, which is disturbing.

Yesterday MySQL kept crashing with OOM errors and resulted in database corruption, so that's what really prompted me to look into this issue.

I'm using the following configuration generated by the Percona Configuration Wizard (slightly modified):

# Generated by Percona Configuration Wizard (http://tools.percona.com/) version REL5_20120208
# MODIFIED SLIGHTLY

[mysql]


CLIENT


port                           = 3306
socket                         = "/var/lib/mysql/mysql.sock"


[mysqld]
slow-query-log=1
long-query-time=1


GENERAL


user                           = mysql
default_storage_engine         = InnoDB
socket                         = "/var/lib/mysql/mysql.sock"
pid_file                       = "/var/lib/mysql/mysql.pid"


MyISAM


key_buffer_size                = 32M
myisam_recover                 = FORCE,BACKUP


SAFETY


max_allowed_packet             = 256M     # Percona said 16M, but I need it larger to avoid errors
max_connect_errors             = 1000000


DATA STORAGE


datadir                        = "/var/lib/mysql/"


######### removed the following because the logs were taking up TONS Of space:


BINARY LOGGING


#log_bin                        = /var/lib/mysql/mysql_bin
#expire_logs_days               = 14
#sync_binlog                    = 1


CACHES AND LIMITS


tmp_table_size                 = 32M
max_heap_table_size            = 32M
query_cache_type               = 0 # was previously 1
query_cache_size               = 0 # was previously 32M
max_connections                = 500
thread_cache_size              = 50
open_files_limit               = 65535 # was previously 4822
table_definition_cache         = 1024
table_open_cache               = 2048 # was previously 1024


INNODB


innodb_flush_method            = O_DIRECT
innodb_log_files_in_group      = 2
innodb_log_file_size           = 128M
innodb_flush_log_at_trx_commit = 1
innodb_file_per_table          = 1
innodb_buffer_pool_size        = 1456M


LOGGING


log_error                      = "/var/lib/mysql/mysql_error.log"
log_queries_not_using_indexes  = 1

As you can see, I increased max_allowed_packet, open_files_limit, and table_open_cache. I made the changes because I was receiving errors (I forget exactly what was causing them now) and making these changes caused the errors to go away.

Also, I noticed the innodb_buffer_pool_size setting is close to how much RAM MySQL is using (which may just be a coincidence), but as this answer suggested I ran the following:

SELECT CEILING(Total_InnoDB_Bytes*1.6/POWER(1024,3)) RIBPS FROM
(SELECT SUM(data_length+index_length) Total_InnoDB_Bytes
FROM information_schema.tables WHERE engine='InnoDB') A;

And the output was 2, which I believe means the recommended innodb_buffer_pool_size is 2GB. If that's correct, then my current setting is even below the recommended amount.

I really don't know what I'm doing and would prefer not to screw things up by blindly making changes to my.cnf. Are there changes I can make to reduce memory usage, or do I just need to upgrade my VPS plan?

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Nate
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1 Answers1

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Strictly speaking the calculation of the recommended buffer pool size above is not correct. It assumes InnoDB works actively with all data. In practice, InnoDB could only touch a fraction of the database.

Check how Innodb_buffer_pool_reads and Innodb_buffer_pool_read_requests changes over time.

mysqladmin -r -i 1 ext | grep -e Innodb_buffer_pool_read_requests -e Innodb_buffer_pool_reads

if Innodb_buffer_pool_reads doesn't change much then all working set (a part of the database InnoDB actively works with) fits in the buffer pool.

Ideally the buffer pool should be as large so Innodb_buffer_pool_reads per second is zero.

You can make the buffer pool smaller, then some reads will be served from the disk, not from the memory.

akuzminsky
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