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We're running Exchange 2010 on a Windows 2000 functional level domain (with 2003 DCs) and we're getting ready to upgrade our domain to 2008 R2. Rather than upgrade the existing domain (with all of it's orphaned accounts and bad data) we have decided to create a new domain from scratch and gradually migrate over to it using domain trusts as a stop gap.

The email address domain isn't changing... @somecompany.com, but the realm is going from abc.def.ghi.net to ijk.local.

Moving users and computers to the new domain is easy, it's getting them access to their respective exchange accounts during the migration and the eventual final move of exchange from the old to new domain that has me stumped. Anyone done something like this before?

Derrick
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I haven't set this up personally yet, but if you're performing a phased migration from one Exchange organization to another with a shared address space, you can use a technique called split domain routing.

Here are a couple of links that might help:

Migrating everybody's mailboxes as PSTs in one shot is definitely the preferred way to go (unless you can keep the same AD domain, moving mailboxes inside of one organization is a breeze), but if you can't do that, the above will allow you to be more gradual about it. Just understand that it requires a lot more hands on work and management.

Jeremy Lyons
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If you're going down the root of creating a cross-forest trust and then using the ADMT tools to migrate user objects etc, you might be able to get away with moving the mailboxes using the Exchange Console/Shell to move the mailboxes across - see Exchange Cross-Forest Migration

If that fails you can use the Exchange shell and export all the mailboxes as PST's and then import them in to the newly installed Exchange - see Import/Export Exchange Mailboxes

I've done a couple of these, haven't really found a proper way to do this other than using group policy very well to re-map drives and configure outlook etc and telling the users I've migrated to log on to domain Y instead of domain X